AAV6 Capsid assay principle

The Adeno-Associated Virus serotype 6 (AAV6) assay measures AAV6 Capsid in cell supernatant or cell lysate. The assay uses two anti-AAV6 antibodies: one coupled to HRP, that binds to anti-HRP d2 (the acceptor) in premix 1, and the other coupled to biotin, that binds to Streptavidin Eu-cryptate (the donor) in premix 2. In presence of AAV6 Capsid in a cell extract or supernatant, the addition of these conjugates brings the donor fluorophore into close proximity with the acceptor, and thereby generates a FRET signal. Its intensity is directly proportional to the concentration of the capsid present in the sample and provides a means of assessing any changes caused by experimental variability under a no-wash assay format.

AAV6 Capsid assay protocol

The AAV6 Capsid assay protocol using a 384-well small volume white plate is described on the right. 5 µL of sample or standard and 5 µL of diluent are dispensed directly into the plate for detection by HTRF® reagents. The Biotin anti-AAV6 antibody is pre-mixed with Streptavidin labeled with the donor, and HRP anti-AAV6 is pre-mixed with anti-HRP labeled with the acceptor. 5 µL of each premix are added. The assay can be run in up to a 1536-well format by simply resizing each addition volume proportionally.

AAV6 Capsid assay specifications

Intra-assay

Inter-assay

Each of the samples was measured in 3 independent experiments performed by different operators, and % CV was calculated for each sample.

Cross reactivities

Cross reactivities were assessed using other serotypes from the AAVs family. Standard curves were generated for each serotype using AAVs capsids diluted in the kit diluent.

5 µL of capsids were transferred into a white detection plate (384 low volume), and 5 µL of diluent followed by 10 µL of the HTRF AAV6 capsid detection reagents were added. The HTRF signal was recorded after an overnight incubation at room temperature.

The assay shows differential affinities depending on the serotype, but does not detect AAV8 and AAV9.

Validation of HTRF AAV6 capsid detection on full and empty AAV6 particles

To demonstrate the detection of both full and empty AAV6 capsids, recognition of full AAV1-CMV-eGFP and empty AAV6 capsids was analyzed in the assay. A large range of AAV6-CMV-eGFP concentrations (GC/mL) was converted into VP/mL using an independent sample quantitation assay. 5 µL of full or empty capsids diluted in the kit diluent were then transferred into a white detection plate (384 low volume), and 5 µL of diluent followed by 10 µL of the HTRF AAV6 capsid detection reagents were added. The HTRF signal was recorded after an overnight incubation at room temperature. As expected, the HTRF AAV6 capsid detection assay could detect both full and empty AAV6 capsids in the same way.